Screening of pathogenic microbiota harbouring antibiotic resistance genes from healthcare wastes in malaysia : (Record no. 100235)

MARC details
000 -LEADER
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003 - CONTROL NUMBER IDENTIFIER
control field MY-KuUP
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20251125110824.0
006 - FIXED-LENGTH DATA ELEMENTS--ADDITIONAL MATERIAL CHARACTERISTICS
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007 - PHYSICAL DESCRIPTION FIXED FIELD--GENERAL INFORMATION
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020 ## - INTERNATIONAL STANDARD BOOK NUMBER
International Standard Book Number THE0009805 (Local)
Qualifying information Hardback
040 ## - CATALOGING SOURCE
Original cataloging agency UMP
Language of cataloging eng
Transcribing agency UMP
Description conventions rda
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) FIST .S54 2023 r Thesis
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Siew Shing Wei,
Relator term author.
245 10 - TITLE STATEMENT
Title Screening of pathogenic microbiota harbouring antibiotic resistance genes from healthcare wastes in malaysia :
Remainder of title a high-throughput amplicon sequencing approach /
Statement of responsibility, etc. Siew Shing Wei
264 #1 - PRODUCTION, PUBLICATION, DISTRIBUTION, MANUFACTURE, AND COPYRIGHT NOTICE
Place of production, publication, distribution, manufacture Kuantan, Pahang :
Name of producer, publisher, distributor, manufacturer UMP,
Date of production, publication, distribution, manufacture, or copyright notice 2023
264 #4 - PRODUCTION, PUBLICATION, DISTRIBUTION, MANUFACTURE, AND COPYRIGHT NOTICE
Date of production, publication, distribution, manufacture, or copyright notice ©2023
300 ## - PHYSICAL DESCRIPTION
Extent xx, 234 pages :
Other physical details illustrations (some color) ;
Dimensions 30 cm. +
Accompanying material 1 CD-ROM
336 ## - CONTENT TYPE
Source rdacontent
Content type term text
336 ## - CONTENT TYPE
Source rdacontent
Content type term text
337 ## - MEDIA TYPE
Source rdamedia
Media type term unmediated
337 ## - MEDIA TYPE
Source rdamedia
Media type term computer
338 ## - CARRIER TYPE
Source rdacarrier
Carrier type term volume
338 ## - CARRIER TYPE
Source rdacarrier
Carrier type term computer disc
347 ## - DIGITAL FILE CHARACTERISTICS
Source rda
File type text file
Encoding format PDF
500 ## - GENERAL NOTE
General note Faculty of Industrial Sciences and Technology
502 ## - DISSERTATION NOTE
Dissertation note Thesis (Master of Science) -- Universiti Malaysia Pahang – 2023
504 ## - BIBLIOGRAPHY, ETC. NOTE
Bibliography, etc. note Includes bibliographical references
520 3# - SUMMARY, ETC.
Summary, etc. The disposal of healthcare waste without prior elimination of pathogens and hazardous contaminants has negative effects on the environment and public health. In past research the microbiological assessment of healthcare wastes employed a culture approach that resulted in the identification of Bacillus sp. in a sample of treated solid healthcare wastes. The effectiveness of microwave in hazardous waste treatment studied based on the survival of tested microorganisms using the culture method may overlook the presence of other pathogens after treatment. Yet, there is scarce data reported on the complete microbial community in microwave-treated healthcare waste using next-generation sequencing technology. This study aimed to profile the complete microbial community, identify viable antibiotic-resistant bacteria in microwave-treated healthcare wastes collected from three different waste operators (FC, FV, and FA) in Peninsular Malaysia, and characterize pathogenic gene markers in isolated organisms. The samples were subjected to bacterial and fungal amplicon sequencing for microbial community characterization, by targeting the full-length 16S ribosomal RNA (rRNA) gene and partial 18S rRNA gene with full-length internal transcribed spacer (ITS) 1 and ITS 2 regions, respectively. Bacterial cultivation was performed to identify viable bacteria in healthcare wastes. The isolated antibiotic-resistant bacteria were subjected to species identification and whole genome sequencing for complete genome characterization. In addition, antibiotic susceptibility testing was performed on the confirmed isolates using the disk diffusion technique to determine the antibiotic resistance patterns. Based on the results of objective 1, the bacterial composition in FC samples was dominated by the Aerococcus, Comamonas, and Pseudomonas genera, while FV and FA were dominated by Bacillus, Paenibacillus, and unclassified Bacilli. All three sets of samples showed significant differences in bacterial diversity, as evidenced by the alpha- (p-value = 0.048) and beta-diversity (p-value < 0.006) analyses. The fungal composition differed significantly between three groups of samples, as evidenced by the alpha- (p-value = 0.045) and beta-diversity (p-value < 0.002). The deep bioinformatic analysis confirmed the presence of blaTEM-1 and penP, which are associated with the production of class A beta-lactamase and beta-lactam resistance pathways. Based on objective 2, the viable bacteria in VFC, VFV, and VFA samples were represented by Proteus, Stenotrophomonas, and Pseudomonas genera, respectively, with significant beta diversity (p-value = 0.003). Based on the BLASTN results, the primary antibiotic-resistant bacteria isolated from VFC, VFV, and VFA samples were Proteus mirabilis, Stenotrophomonas maltophilia, and Pseudomonas sp., respectively. As no specific Pseudomonas species were identified from the database, this bacterium is potentially present as a novel bacterium. For objective 3, P. mirabilis and S. maltophilia were discovered to contain genes associated with virulence function and transposable element expression. The antibiotic resistance genes blaOXA-10 and sul1 were identified in P. mirabilis and S. maltophilia, conferring resistance to beta-lactam and folate pathway antagonist antibiotics. The antibiotic susceptibility tests revealed that P. mirabilis and S. maltophilia were multidrug-resistant bacteria, exhibiting resistance to drugs from multiple classes, including carbapenem. In conclusion, microorganisms and contaminants, which serve as putative indicators in healthcare waste treatment evaluation, revealed the limitations of the microwave sterilization method in microbial inactivation. Our findings suggested that the occurrence of clinically relevant microorganisms, antibiotic contaminants, and associated antibiotic resistance genes represents environmental and human health hazards when released into landfills via horizontal gene transfer.
610 20 - SUBJECT ADDED ENTRY--CORPORATE NAME
Corporate name or jurisdiction name as entry element Faculty of Industrial Sciences and Technology
General subdivision Dissertations
650 #0 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element Universities and colleges
General subdivision Dissertations
650 #0 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element Theses
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Source of classification or shelving scheme Library of Congress Classification
Koha item type Thesis
Holdings
Withdrawn status Lost status Source of classification or shelving scheme Damaged status Not for loan Collection Home library Current library Date acquired Total checkouts Full call number Barcode Date last seen Copy number Price effective from Koha item type
  Not lost Library of Congress Classification   Not for loan Reference UMPLIB GAMBANG UMPLIB GAMBANG 28/11/2023   FIST .S54 2023 r Thesis T000002824 28/11/2023 1 28/11/2023 Thesis
  Not lost Library of Congress Classification   In Transit Reference UMPLIB GAMBANG UMPLIB GAMBANG 28/11/2023   CD13487 T000002825 28/11/2023 1 28/11/2023 Thesis

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