In silico characterization of selected orchids’ glycosaminoglycan-related proteins / (Record no. 103926)

MARC details
000 -LEADER
fixed length control field 03400ntm a2200349 i 4500
003 - CONTROL NUMBER IDENTIFIER
control field MY-KuUP
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20260126120353.0
006 - FIXED-LENGTH DATA ELEMENTS--ADDITIONAL MATERIAL CHARACTERISTICS
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007 - PHYSICAL DESCRIPTION FIXED FIELD--GENERAL INFORMATION
fixed length control field ta
008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION
fixed length control field 260126t20252025my a|||fs|||| 000 0 eng d
020 ## - INTERNATIONAL STANDARD BOOK NUMBER
International Standard Book Number THE0010314 (Local)
Qualifying information Hardback
040 ## - CATALOGING SOURCE
Original cataloging agency UMPSA
Language of cataloging eng
Transcribing agency UMPSA
Description conventions rda
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) FIST .A88 2025 r Bc.
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Nur Izzatul Shahira Binti Zulkifli,
Relator term author.
245 10 - TITLE STATEMENT
Title In silico characterization of selected orchids’ glycosaminoglycan-related proteins /
Statement of responsibility, etc. Nur Izzatul Shahira Binti Zulkifli
264 #1 - PRODUCTION, PUBLICATION, DISTRIBUTION, MANUFACTURE, AND COPYRIGHT NOTICE
Place of production, publication, distribution, manufacture Kuantan, Pahang :
Name of producer, publisher, distributor, manufacturer UMPSA,
Date of production, publication, distribution, manufacture, or copyright notice c2025
264 #4 - PRODUCTION, PUBLICATION, DISTRIBUTION, MANUFACTURE, AND COPYRIGHT NOTICE
Date of production, publication, distribution, manufacture, or copyright notice © 2025
300 ## - PHYSICAL DESCRIPTION
Extent xiii, 68 pages :
Other physical details illustrations ;
336 ## - CONTENT TYPE
Source rdacontent
Content type term text
337 ## - MEDIA TYPE
Source rdamedia
Media type term unmediated
338 ## - CARRIER TYPE
Source rdacarrier
Carrier type term volume
347 ## - DIGITAL FILE CHARACTERISTICS
Source rda
File type text file
Encoding format PDF
500 ## - GENERAL NOTE
General note Faculty of Industrial Sciences and Technology
502 ## - DISSERTATION NOTE
Dissertation note Final Year Report (Bachelor of Applied Science in Industrial Biotechnology) -- Universiti Malaysia Pahang Al-Sultan Abdullah - 2025
504 ## - BIBLIOGRAPHY, ETC. NOTE
Bibliography, etc. note Include bibliographical reference
520 3# - SUMMARY, ETC.
Summary, etc. This study are focusing on in silico characterization of selected orchid’s glycosaminoglycan- related proteins in which to identify the catalytic regions of selected orchids’. The orchids are a complex and extensive flowering plant family classified scientifically as Orchidaceae. They constitute one of the largest flowering plant families, with approximately 25,000 species and 100,000 hybrids and cultivars. Orchids are valued for their intricate, vivid blossoms and are frequently linked with beauty, elegance, and foreignness. Moreover, glycosaminoglycan or (GAGs) is a long, unbranched polysaccharides composed of repeating disaccharide units. The selected orchid’s that been selected is Vanda Tan Chay Yan, Phalaenopsis equestris, Dendrobium nobile, Dendrobium catenatum and Apostasia shenzhenca. All selected orchids had been chose to do predicted 3D-protein structure by using homology modelling in which the use of online software tools such as Pyrx, SWISS-MODEL, Bioedit, CASTp, SAVEs6.0SERVER, BLASTp, Chimera 1.16 and PyMOL. Three online tools (Verify 3D, Procheck, and ERRAT) are used to analyze the quality of 3D-protein structures. The most suitable models of proteins are then selected through refinement. The Pyrx platform's Autodock Vina software was used to dock interactions between protein and ligand and compare them to CASTp's predicted active site pocket analysis. Chimera software was used to visualize the ligand-binding orientation. All of the online software tools had been using to generate the potential 3D model of selected orchids, it also used to Molecular docking will be used to study the binding sites of possible ligands to the 3D structure of a glycosaminoglycan-related protein from chosen orchids. In this research, there are three type of ligands that been identify which is keratin sulphate, heparin sulphate and chondroitin sulphate and the ligands were separated with different colours to easy identifying of their attachment. Overall, it is a success to generate the predicted molecular docking.
610 20 - SUBJECT ADDED ENTRY--CORPORATE NAME
Corporate name or jurisdiction name as entry element Faculty of Industrial Sciences and Technology
General subdivision Dissertations
650 #0 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element Universities and colleges
General subdivision Dissertations
650 #0 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element Final Year Report
General subdivision Dissertations
856 ## - ELECTRONIC LOCATION AND ACCESS
Uniform Resource Identifier http://umpir.ump.edu.my/id/eprint/45695
942 ## - ADDED ENTRY ELEMENTS (KOHA)
Source of classification or shelving scheme Library of Congress Classification
Koha item type Final Year Report
Holdings
Withdrawn status Lost status Source of classification or shelving scheme Damaged status Not for loan Permanent Location Current Location Date acquired Total Checkouts Full call number Barcode Date last seen Price effective from Koha item type
  Not lost Library of Congress Classification     UMPLIB GAMBANG UMPLIB GAMBANG 26/01/2026   FIST .A88 2025 r Bc. T000003693 26/01/2026 26/01/2026 Final Year Report

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